Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015909017.1_cds_XP_016459273.1_52811
CDS Infomation	[gene=LOC107782851] [db_xref=GeneID:107782851] [protein=sec1 family domain-containing protein MIP3-like isoform X2] [protein_id=XP_016459273.1] [location=join(22017..22034,22817..22966,24290..24799,25565..27106,27177..27245,27732..27860)] [gbkey=CDS]
Sequence	ATGTCTCCTCTCGATAAGGTGGTTGATTGGAACTCGACTTCTGGGCCTGCAAAGAAAATT GTTGTCATTACGTCACGTCTTCTAAGTGATGCACATAGATATATTTTACGTTGCCTGAGT GCACTTCAGACTATCTGCAGCTGTGCTATATTTACATGCATCTCAGAGACGGGTCACTCA GCATGTCCTGAGTCACCGTTAGGACCGGATGCATATCGTGAATATGAATCCTTTCTTGTC CAAGATTATGAGGAGCTTGCTGGAAAGTCTCTGAGGAACTCTAGTCATGCTGGAGAGAGC ACAGTAAAGGAAAGTGTGTCCGCTGAAGATGAAGGGTGGTCACAATTAACCACCAGTGAA GAAGCGACTCCTAATTTCAGTTCTGTTGCAAGTCCACAAAAACTTTATGGTGACAGTGTA ATTGACCTGAGAGAAGATGTAGGGAAAAAGTTGAAAGTTTCTGTGCATCATTTCCCTTTG GTCTTGTGTCCCTTTTCACCCAGATTCTTTGTCTTGCCTTCAGAAGGATCAGTAGCTGAA GCATACCTGTCCACTGAACATGGTAACTCTATGAGCTTTGGGTTGCCTCCAATAAGTACT GGGACACCTGCCGATGGTGAGGATGTCCCTCCTGGGGCAATTCTTACCGCTCAATTTCTT TATCATCTGGCGGCAAAGATGGACCTGAAACTTGAAATATTTTCCCTGGGTGATATTTCA AAAACTGTTGGAAAGCTTCTGACGGACATGTCAAGTCTTTATGACGTCGGTCGACGTAAG AGATCTGCAGGGCTATTACTCATAGATCGCACACTTGACCTTCTTACTCCCTGCTGTCAT GGTGACTCACTTGTGGATCGAATGTTTTCATCATTGCCTCGCAGGGAACGGATGTCGCCC TTAAGTCAAGCTAAAAGCTCGCAAAGCCAGCTTAAACTTGGCCCCGCTTACTTGCAACGT TCTCCTCTTACTGTTCAGATACCACTGAATAATAGTTTAAGAGAGGAGACTTCTAGTTTT GACAACTTTCAGCTGGTGGAAAACATTGAAGCATTTCTCCGTGGCTGGAGTTCTAGAGAC TCAACTTCTCAAATGGTTGAGTTGGTGAATCTTAGCGCTAAACTTAGTGATGAAATGTCC TCGCAAGATTTTCAGAGTGACCTTCTTTGTGGTTCTTTTGTCTCCACGGAGAATTTTCAT GGAACACCATACCTGGAAGCCATACTAGAGCGAAGGACAAAAGATGGGGCTGTTCTGATC AAGAAATGGCTGCAGGAAAGTTTACGTCGCGAAAATATGTCATTGAACTTAAAAGTACGT CCTGGTTATGTTTCAAAATCAGATTTGCAGCCTATGATTAAGGCATTGGCCAAAAGCCAG TCATCTTTGACGAAAAACAAAGGAATCATCCAGTTAGCTGCAGCAGCATTATATGCTTTA GATGAATCACATAGTGCTAAATGGGATGCATTTAACAGTGCTGAGAAGATACTGAATGTA AATGCTGGAGACACAAGCCAGAGTCTTGCTGCTCAAATTAGTGATCTCATAAATAAAAGT GCTTTTGTTAGTTCCCAGGGAAATAATAAGATGGATGCTCAACGGGGGCTTCTTACTCTA CAAGATGCTCTTCTTCTCACAATTGTTGGATATATATTGGCAGGTGAGAATTTCCCATCT TCTGGGACTGTTGGTCCTTTCTCTTGGCAAGAGGAACATTTTATGAAAGAAGCTATTGTT GATGCGATTGTTGAGAACCCAACAGTTGCAAAATTAAAGTTTCTGCAAGGTTTAACTCAG GATCTTGAAGCCAACTTTAACAGACAATCAGAAGAAAAGAAGGAAGGTCTTTCTAATACT GAAGGTGTTGATTTTGATGATGACGATTGGGGTAGTTGGGGTGATGAAGATGCTGGAAAA GATAAAAACAAAGAGCAAGTGTATGGTGACATGCAGCTAAAGTTAGAGTTGCGTGATAGG GCGGATAATCTTTTCAAATTCTTTCACAAATTGTCCAGCTTAAAGAAGAACATTTCATTC AGAGAGTGGTCACAGGCTCTGGAGAGTAAGTTCAATGATGATCCTTACTCAAAGAAAGGA CTACTTTATAAAGTGCTTTCAAGGGTGCTGGCTAAGCATGAAGTACCTGGTTTAGAGTAT CATTCATCTACTGTTGGCCGGCTATTCAAAAGCGGGTTTGGGAGATTTGGCCTTGGGCAG GCAAAACCAAGTCTGGCAGATCAAGATGTCATTCTCGTTTTTGTTGTCGGGGGCATAAAT GCTGTTGAGGTTCGAGAAGCTCGGGAGGCATTATCTGAGAGCAGTAGGCCTGAGGTTGAA TTGATTATTGGCGGAACGACTCTTCTTACACCTAACGATATGTTTGAATTACTGCTGGGC GATTGTTCTTGCGTTTAA

Peptide Sequence

PEP ID	XP_016459273.1
PEP Infomation	PREDICTED: sec1 family domain-containing protein MIP3-like isoform X2 [Nicotiana tabacum]
Sequence	MSPLDKVVDWNSTSGPAKKIVVITSRLLSDAHRYILRCLSALQTICSCAIFTCISETGHS ACPESPLGPDAYREYESFLVQDYEELAGKSLRNSSHAGESTVKESVSAEDEGWSQLTTSE EATPNFSSVASPQKLYGDSVIDLREDVGKKLKVSVHHFPLVLCPFSPRFFVLPSEGSVAE AYLSTEHGNSMSFGLPPISTGTPADGEDVPPGAILTAQFLYHLAAKMDLKLEIFSLGDIS KTVGKLLTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLVDRMFSSLPRRERMSP LSQAKSSQSQLKLGPAYLQRSPLTVQIPLNNSLREETSSFDNFQLVENIEAFLRGWSSRD STSQMVELVNLSAKLSDEMSSQDFQSDLLCGSFVSTENFHGTPYLEAILERRTKDGAVLI KKWLQESLRRENMSLNLKVRPGYVSKSDLQPMIKALAKSQSSLTKNKGIIQLAAAALYAL DESHSAKWDAFNSAEKILNVNAGDTSQSLAAQISDLINKSAFVSSQGNNKMDAQRGLLTL QDALLLTIVGYILAGENFPSSGTVGPFSWQEEHFMKEAIVDAIVENPTVAKLKFLQGLTQ DLEANFNRQSEEKKEGLSNTEGVDFDDDDWGSWGDEDAGKDKNKEQVYGDMQLKLELRDR ADNLFKFFHKLSSLKKNISFREWSQALESKFNDDPYSKKGLLYKVLSRVLAKHEVPGLEY HSSTVGRLFKSGFGRFGLGQAKPSLADQDVILVFVVGGINAVEVREAREALSESSRPEVE LIIGGTTLLTPNDMFELLLGDCSCV

Transcript Sequence

Gene sequence data has not been registered.